Browse of TCMCG013C32197 protein

CDS

Accession Number	TCMCG013C32197
gbkey	CDS
Protein Id	XP_006490255.1
Location	join(15494632..15494954,15495102..15495248,15496760..15496913,15497806..15497941,15499730..15499875,15500444..15500539,15500663..15500715,15501064..15501195,15501423..15501474,15501593..15501712,15502073..15502207,15503179..15503307,15503649..15503726,15504701..15504841,15505420..15505514,15506362..15506558,15507792..15508579,15509522..15509602,15509703..15509771,15509870..15509947,15510685..15510915,15512906..15513037,15513230..15513406,15514654..15514839,15515413..15515798,15516271..15516385)
Gene	LOC102624179
GeneID	102624179
Organism	Citrus sinensis

Protein

Length	1458aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA225998
db_source	XM_006490192.3
Definition	cleavage and polyadenylation specificity factor subunit 1 isoform X1 [Citrus sinensis]

EGGNOG-MAPPER Annotation

COG_category	A
Description	Cleavage and polyadenylation specificity factor
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko03019        [VIEW IN KEGG] ko03021        [VIEW IN KEGG]
KEGG_ko	ko:K14401        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko03015        [VIEW IN KEGG] map03015        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0003676        [VIEW IN EMBL-EBI] GO:0003723        [VIEW IN EMBL-EBI] GO:0003729        [VIEW IN EMBL-EBI] GO:0005488        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0005829        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006378        [VIEW IN EMBL-EBI] GO:0006379        [VIEW IN EMBL-EBI] GO:0006396        [VIEW IN EMBL-EBI] GO:0006397        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010467        [VIEW IN EMBL-EBI] GO:0016070        [VIEW IN EMBL-EBI] GO:0016071        [VIEW IN EMBL-EBI] GO:0031123        [VIEW IN EMBL-EBI] GO:0031124        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043631        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0090305        [VIEW IN EMBL-EBI] GO:0090501        [VIEW IN EMBL-EBI] GO:0097159        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI] GO:1901363        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGAGCTTCGCGGCCTACAAAATGATGCACTGGCCCACCGGCATAGCCAATTGCGGGTCGGGTTTCATCACCCACTCACGTGCCGACTACGTGCCCCAAATTCCGTTAATTCAAACCGAAGAACTCGATTCCGAGTTGCCCTCCAAGCGCGGAATCGGCCCCGTTCCTAATCTCGTCGTCACGGCCGCTAACGTTATTGAAATTTATGTAGTTAGGGTTCAAGAAGAGGGCAGTAAAGAGTCCAAAAATTCTGGAGAAACAAAACGCCGCGTTTTAATGGACGGCATCTCCGCTGCTTCCCTCGAGCTCGTTTGCCATTACAGGTTGCATGGTAATGTGGAGTCACTAGCGATACTATCCCAAGGAGGGGCTGACAATTCTAGAAGAAGGGATTCCATTATTTTGGCGTTTGAAGATGCAAAAATCTCGGTTTTGGAGTTTGACGATTCAATTCACGGACTTCGTATCACCTCTATGCACTGTTTTGAGAGTCCAGAGTGGCTTCATTTGAAAAGAGGTAGAGAATCATTTGCAAGAGGCCCGTTGGTAAAGGTTGATCCTCAAGGCAGGTGCGGCGGCGTTCTTGTTTATGGATTGCAAATGATAATTCTAAAGGCTTCTCAGGGTGGATCTGGTTTGGTTGGAGATGAAGATACTTTTGGTTCAGGAGGTGGATTTTCTGCTCGCATAGAATCATCTCATGTCATCAACTTAAGAGATTTGGACATGAAGCATGTAAAAGACTTCATATTTGTACATGGTTATATTGAGCCTGTGATGGTCATACTTCATGAGCGAGAGCTTACTTGGGCTGGGCGAGTCTCATGGAAGCACCATACTTGTATGATTTCTGCATTAAGTATCAGTACAACTTTAAAGCAGCATCCTCTTATATGGTCAGCCATGAATCTCCCTCATGATGCTTACAAGCTACTTGCAGTGCCATCTCCAATCGGTGGTGTTCTTGTGGTTGGTGCAAACACAATTCACTATCATAGTCAGTCAGCTTCATGTGCATTGGCTTTAAATAATTATGCCGTTTCTCTTGATAGCAGTCAAGAGCTGCCAAGATCAAGTTTCAGTGTGGAACTTGATGCTGCCCATGCTACTTGGTTGCAAAACGACGTGGCGTTGCTGTCAACAAAAACTGGAGATTTAGTACTTCTGACCGTTGTTTATGATGGCCGGGTTGTGCAGAGACTTGATCTTTCCAAGACCAATCCTTCTGTACTTACTTCGGACATTACAACTATTGGAAATTCATTATTCTTTTTGGGTAGTCGGTTGGGAGACAGTCTGCTTGTGCAATTTACTTGTGGATCGGGCACCTCAATGTTGTCATCAGGTCTGAAAGAAGAGTTTGGAGATATTGAAGCTGATGCTCCTTCAACGAAGAGATTGCGGAGGTCTTCTTCTGATGCCTTGCAAGATATGGTTAATGGTGAAGAGCTTTCTTTATACGGTTCAGCTTCAAATAACACGGAATCAGCACAGAAAACTTTCTCTTTTGCTGTGAGGGATTCATTGGTTAACATTGGACCTTTGAAGGACTTCTCTTATGGCCTGAGAATAAATGCTGATGCTAGTGCAACTGGAATTTCCAAACAAAGTAATTATGAACTGGTGTGCTGCTCTGGCCATGGAAAAAATGGTGCTCTGTGTGTACTTCGGCAGTCTATTCGCCCAGAAATGATTACTGAGGTTGAACTCCCGGGTTGCAAAGGAATTTGGACTGTTTACCACAAGAGTTCTCGGGGTCATAATGCTGATTCTTCTAGAATGGCTGCTTACGATGATGAGTATCATGCATATTTAATTATAAGCTTGGAGGCTAGAACAATGGTACTTGAAACAGCTGATCTTTTAACAGAAGTCACTGAAAGTGTGGACTATTTTGTGCAAGGCAGAACAATTGCTGCTGGTAATTTGTTTGGAAGGCGTCGAGTTATTCAGGTCTTTGAACGTGGTGCTCGGATTTTGGATGGCTCTTATATGACTCAAGATTTAAGCTTTGGTCCTTCGAACTCTGAATCTGGTTCTGGTTCAGAGAATTCCACTGTGTTGTCTGTTTCAATTGCTGATCCATATGTGTTGCTAGGAATGAGTGATGGAAGTATTCGGCTTCTTGTTGGAGATCCTTCTACTTGCACTGTTTCTGTACAGACTCCTGCAGCCATTGAAAGCTCAAAGAAGCCAGTCTCTTCCTGTACACTGTATCATGACAAAGGACCAGAACCATGGCTTCGGAAGACAAGTACTGATGCATGGCTTTCTACTGGTGTTGGGGAGGCCATCGATGGTGCTGATGGTGGGCCTCTTGATCAGGGAGATATATACAGTGTTGTTTGTTATGAGAGTGGTGCCTTAGAAATATTCGATGTGCCAAATTTTAATTGTGTTTTTACTGTGGATAAATTTGTGTCTGGAAGGACTCACATTGTTGATACCTATATGCGGGAAGCTCTGAAAGATTCTGAGACAGAGATTAACAGTAGCTCTGAAGAGGGAACTGGCCAAGGAAGGAAAGAAAATATCCATAGCATGAAGGTTGTTGAGTTAGCCATGCAAAGGTGGTCTGGACATCATAGTCGTCCATTTCTTTTTGCCATATTAACCGATGGGACAATCCTGTGTTACCAAGCTTACCTGTTTGAAGGTCCAGAGAATACTTCTAAGAGTGATGATCCTGTCTCTACCTCACGTTCTCTCAGTGTTAGCAATGTTAGTGCTTCTAGGCTTAGGAATCTGAGATTTGCTCGCATCCCACTGGATGCATACACAAGGGAGGAGACACCTCATGGAGCCCCATGCCAAAGAATTACCATTTTCAAAAACATTAGTGGTCATCAAGGATTTTTTCTTTCTGGGTCAAGACCATGTTGGTGTATGGTTTTCAGAGAGCGGCTTCGAGTTCATCCACAGCTATGTGATGGATCTATTGTGGCCTTCACTGTTCTTCATAATGTGAATTGTAATCATGGTTTCATATACGTTACATCTCAGGGCATTTTAAAGATCTGCCAATTGCCATCTGGATCAACTTATGACAACTATTGGCCAGTGCAAAAAGTGATTCCATTGAAAGCTACTCCACATCAAATCACTTACTTTGCTGAGAAGAATTTGTACCCTCTAATTGTTTCAGTTCCTGTTCTTAAGCCCCTAAATCAAGTTCTTTCATTGCTGATTGACCAAGAAGTTGGCCATCAGATTGACAATCACAATTTAAGTTCTGTTGATCTCCATCGAACTTACACTGTAGAGGAGTATGAGGTTCGAATTCTAGAACCTGATAGGGCTGGTGGCCCTTGGCAAACAAGGGCTACAATCCCAATGCAAAGTTCTGAAAATGCGCTAACTGTGCGAGTGGTTACACTGTTTAACACAACCACGAAAGAGAATGAAACACTGTTGGCTATTGGAACTGCTTATGTCCAAGGGGAGGATGTTGCTGCAAGAGGACGTGTACTTTTGTTTTCTACTGGAAGAAATGCTGATAATCCTCAGAATTTGGTAACAGAGGTTTATTCAAAGGAATTGAAGGGTGCTATATCTGCTTTAGCCTCTCTTCAAGGTCATCTGTTAATAGCTTCTGGTCCAAAAATTATTCTACACAAGTGGACTGGTACTGAGTTGAATGGAATCGCTTTCTATGATGCTCCACCATTATATGTTGTGAGCTTAAATATTGTCAAGAATTTTATCCTCCTTGGTGACATTCATAAAAGCATATACTTCCTTAGTTGGAAGGAACAAGGAGCTCAACTTAACTTATTGGCCAAAGATTTTGGCTCTCTTGATTGTTTTGCAACAGAGTTTTTGATAGATGGAAGCACACTGAGTCTCGTGGTTTCAGATGAGCAAAAGAATATTCAGATTTTCTATTATGCACCAAAGATGTCTGAGAGTTGGAAGGGACAAAAGCTTCTTTCAAGGGCTGAATTTCATGTTGGTGCTCATGTTACAAAATTCTTGCGGCTGCAGATGCTTGCAACTTCATCTGATCGAACTGGTGCTGCTCCGGGCTCTGATAAAACAAATCGCTTTGCTTTGTTGTTTGGTACCCTGGATGGCAGCATTGGTTGTATTGCACCTCTTGATGAACTTACATTCCGTAGGTTGCAGTCCCTTCAGAAAAAGCTTGTTGATTCCGTTCCCCATGTTGCTGGCTTAAATCCAAGATCTTTCCGCCAGTTCCATTCAAATGGAAAGGCTCATCGGCCTGGTCCTGACAGCATTGTTGACTGTGAACTGCTCAGCCATTATGAGATGCTTCCGTTGGAGGAACAACTTGAAATTGCTCACCAGACTGGAACAACTCGTTCACAAATTCTTTCAAATTTAAATGACCTTGCTCTAGGAACTAGCTTCTTGTGA

Protein:   MSFAAYKMMHWPTGIANCGSGFITHSRADYVPQIPLIQTEELDSELPSKRGIGPVPNLVVTAANVIEIYVVRVQEEGSKESKNSGETKRRVLMDGISAASLELVCHYRLHGNVESLAILSQGGADNSRRRDSIILAFEDAKISVLEFDDSIHGLRITSMHCFESPEWLHLKRGRESFARGPLVKVDPQGRCGGVLVYGLQMIILKASQGGSGLVGDEDTFGSGGGFSARIESSHVINLRDLDMKHVKDFIFVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSAMNLPHDAYKLLAVPSPIGGVLVVGANTIHYHSQSASCALALNNYAVSLDSSQELPRSSFSVELDAAHATWLQNDVALLSTKTGDLVLLTVVYDGRVVQRLDLSKTNPSVLTSDITTIGNSLFFLGSRLGDSLLVQFTCGSGTSMLSSGLKEEFGDIEADAPSTKRLRRSSSDALQDMVNGEELSLYGSASNNTESAQKTFSFAVRDSLVNIGPLKDFSYGLRINADASATGISKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEVELPGCKGIWTVYHKSSRGHNADSSRMAAYDDEYHAYLIISLEARTMVLETADLLTEVTESVDYFVQGRTIAAGNLFGRRRVIQVFERGARILDGSYMTQDLSFGPSNSESGSGSENSTVLSVSIADPYVLLGMSDGSIRLLVGDPSTCTVSVQTPAAIESSKKPVSSCTLYHDKGPEPWLRKTSTDAWLSTGVGEAIDGADGGPLDQGDIYSVVCYESGALEIFDVPNFNCVFTVDKFVSGRTHIVDTYMREALKDSETEINSSSEEGTGQGRKENIHSMKVVELAMQRWSGHHSRPFLFAILTDGTILCYQAYLFEGPENTSKSDDPVSTSRSLSVSNVSASRLRNLRFARIPLDAYTREETPHGAPCQRITIFKNISGHQGFFLSGSRPCWCMVFRERLRVHPQLCDGSIVAFTVLHNVNCNHGFIYVTSQGILKICQLPSGSTYDNYWPVQKVIPLKATPHQITYFAEKNLYPLIVSVPVLKPLNQVLSLLIDQEVGHQIDNHNLSSVDLHRTYTVEEYEVRILEPDRAGGPWQTRATIPMQSSENALTVRVVTLFNTTTKENETLLAIGTAYVQGEDVAARGRVLLFSTGRNADNPQNLVTEVYSKELKGAISALASLQGHLLIASGPKIILHKWTGTELNGIAFYDAPPLYVVSLNIVKNFILLGDIHKSIYFLSWKEQGAQLNLLAKDFGSLDCFATEFLIDGSTLSLVVSDEQKNIQIFYYAPKMSESWKGQKLLSRAEFHVGAHVTKFLRLQMLATSSDRTGAAPGSDKTNRFALLFGTLDGSIGCIAPLDELTFRRLQSLQKKLVDSVPHVAGLNPRSFRQFHSNGKAHRPGPDSIVDCELLSHYEMLPLEEQLEIAHQTGTTRSQILSNLNDLALGTSFL